Incucyte® Base Analysis Software

The Incucyte® Analysis Software simplifies the complex, yet provides a powerful workflow that supports your entire research team.

A guided interface and purpose-built tools make the process of acquiring, viewing, analyzing and sharing images of living cells easier than ever before.


Stress-free Image Acquisition

  • Guided interface enables even first-time users to set up long-term, live-cell experiments
  • Flexible scheduling tool allows multiple users to run multiple applications in parallel

Insight-generating Visualization

  • Incucyte® VesselView displays a birds-eye view of the entire vessel to give you a snapshot of your experiment, plus tools to quickly navigate through images and time
  • Quickly assess trends and outliers, and validate with metric overlays

Powerful, Purpose-built Analysis

  • Guided interface makes processing thousands of wells of data possible for non-experts
  • Graphing tools designed by biologists enable publication-ready graphs without the need for third-party software
Incucyte® Base Software Workflow


Incucyte® Acquisition interface guides users through experimental set up using your choice of microplates, flasks and dishes. Simply select parameters and hit “Start” for fool-proof, continuous live-cell image acquisition.

Interface guides users through experimental set up enabling even first-time users to set-up an experiment within minutes.

New scheduling feature seamlessly accommodates multiple users and applications in parallel.


Incucyte® VesselView enables users to navigate and explore thousands of timelapse images with unprecedented efficiency. By viewing images of all locations in your experiment at once, you can quickly assess treatment effects or identify outliers. You can also overlay metrics for rapid assessment and verification of image processing parameters. Then, generate presentation-ready images and movies with just a few clicks.

Easily view images of all locations in an experiment at once to scan for trends and outliers, then zoom in on wells of interest.


Incucyte® Analysis interface enables even first-time users to convert images into insight. By providing purpose-built tools to answer your scientific questions, image processing and analysis is uncomplicated yet extremely powerful. Create analysis definitions once, and then reapply to subsequent experiments to generate real-time metrics that enable decision-making. Easily view all trends in an experiment at once with Incucyte®’s PlateGraph, and create customized response curves that are ready for publication and presentation.

Guided analysis interface enables even first-time users to convert images into insight.

Graphing tools enable review of trends and rapid generation of publication- and presentation-ready graphs.

Ordering Information

Incucyte® Base Software

Software Module


Cat. No.

Incucyte® Base Software

User-friendly software suite for image acquisition, viewing, and analysis

Included with Incucyte® System

Add-on Software Modules

Software Module


Cat. No.

Incucyte® Angiogenesis Analysis Software Module

Measure vascular tube dynamics in 96-well format


Incucyte® Cell-By-Cell Analysis Software Module

For label-free identification, classification, and analysis of subsets of cells


Incucyte® Chemotaxis Analysis Software Module

Automatically analyze label-free and fluorescently-labeled chemotactic cell migration images acquired using the ClearView® cell migration plate


Incucyte® Neuronal Activity Analysis Software Module

Analyze the activity and connectivity of neuronal networks by capturing short-term kinetics over extended time periods while qualitatively monitoring cell morphology in each well of a 96-well plate


Incucyte® Neurotrack Analysis Software Module

Automatically analyze neurite dynamics  without labels in living cells


Incucyte® Scratch Wound Analysis Software Module

Enable precise, reproducible measurement of cell migration and invasion in scratch wound assays

(Also included in
Incucyte® Cell Migration Kit
Cat. No. 4493)

Incucyte® Spheroid Analysis Software Module

Acquire and analyze single spheroids cultured in round-bottom plates or multi-spheroids grown in flat-botom plates


Incucyte® Base Software Resources

Live-Cell Analysis 5th Edition Handbook

Real-time live-cell analysis is redefining the possibilities and workflows of cell biology.

Download eBook
cytokine app note

Application Note

Combined Live Cell and Flow Cytometry Analysis of Immune Cell Killing

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live cell analysis

Incucyte® Live Cell Analysis System

Gain insights into biological processes of cells in real time via non-perturbing quantitative analysis

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Incucyte® Incustore

Ideal if you use your Incucyte intensively as it keeps data on-line and at your fingertips for longer. The RAID 6 configuration of 8 x 6TB hard...

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